#NEXUS
BEGIN TAXA;
    Dimensions NTax = 53;
    TaxLabels 'Aquifex aeolicus' 'Thermotoga maritima' 'Thermus thermophilus' 'Cytophaga hutchinsonii' 'Bacillus subtilis' 'Mycobacterium tuberculosis' 'Anaeromyxobacter dehalogenans' 'Agrobacterium tumefaciens' 'Pseudomonas entomophila' 'Escherichia coli' 'Nanoarchaeum equitans' 'Candidatus Korarchaeum' 'Thermofilum pendens strain Hrk 5' 'Caldivirga maquilingensis IC-167' 'Pyrobaculum arsenaticum DSM' 'Thermoproteus neutrophilus V24Sta' 'Metallosphaera sedula DSM 5348' 'Sulfolobus acidocaldarius DSM 639' 'Aeropyrum pernix K1' 'Ignicoccus hospitalis KIN4/I' 'Staphylothermus marinus F1' 'Desulfurococcus kamchatkensis' 'Methanopyrus kandleri Av19' 'Cenarchaeum symbiosum' 'Nitrosopumilus maritimus SCM1' 'Uncultured crenarchaeote 74A4' 'Uncultured marine crenarchaeote KM3-34-D9' 'Thermoplasma volcanium GSS1' 'Picrophilus torridus DSM 9790' 'Thermococcus kodakarensis Kod1' 'Pyrococcus abyssi GE5' 'Methanothermobacter thermautotrophicus str. delta h' 'Methanobrevibacter smithii ATCC 35061' 'Methanocaldococcus jannaschii DSM 2661' 'Methanococcus maripaludis S2' 'Methanococcus voltae A3' 'Archaeoglobus fulgidus strain DSM 4304' 'Halobacterium salinarium R1' 'Haloarcula marismortui strain ATCC 43049' 'Halorubrum lacusprofundi ATCC 49239' 'Methanospirillum hungatei JF-1' 'Methanocorpusculum labreanum Z' 'Methanosaeta thermophila strain PT' 'Methanosarcina barkeri str. fusaro' 'Methanococcoides burtonii DSM 6242' 'Archaeoglobus fulgidus DSM 4304' 'Methanopyrus kandleri AV19' 'Thermofilum pendens HRK 5' 'Picrophilus torridus DSM9790' 'Methanothermobacter thermautotrophicus str. delta H' 'Methanococcus maripaludis s2' 'Haloarcula marismortui ATCC 43049' 'Methanosaeta thermophila PT' ;
END;
BEGIN TREES;
    Tree tree6307 = ((('Aquifex aeolicus':1371,('Thermotoga maritima':1253,'Thermus thermophilus':1349):794):840,('Cytophaga hutchinsonii':1742,('Bacillus subtilis':1397,('Mycobacterium tuberculosis':1553,('Anaeromyxobacter dehalogenans':1277,('Agrobacterium tumefaciens':1361,('Pseudomonas entomophila':1002,'Escherichia coli':1096):1021):807):846):630):667):900):1306.5,(('Nanoarchaeum equitans':2104,('Candidatus Korarchaeum':2140,(('Thermofilum pendens strain Hrk 5':1681,('Caldivirga maquilingensis IC-167':1520,('Pyrobaculum arsenaticum DSM':475,'Thermoproteus neutrophilus V24Sta':482):1161):1195):745,(('Metallosphaera sedula DSM 5348':1193,'Sulfolobus acidocaldarius DSM 639':1119):1149,(('Aeropyrum pernix K1':1595,'Ignicoccus hospitalis KIN4/I':1458):721,('Staphylothermus marinus F1':893,'Desulfurococcus kamchatkensis':1188):783):643):792):984):811):627,(('Methanopyrus kandleri Av19':1659,('Cenarchaeum symbiosum':928,('Nitrosopumilus maritimus SCM1':39,('Uncultured crenarchaeote 74A4','Uncultured marine crenarchaeote KM3-34-D9'):76):909):2212):832,(('Thermoplasma volcanium GSS1':1155,'Picrophilus torridus DSM 9790':1202):1693,((('Thermococcus kodakarensis Kod1':569,'Pyrococcus abyssi GE5':493):1163,(('Methanothermobacter thermautotrophicus str. delta h':956,'Methanobrevibacter smithii ATCC 35061':1212):1153,('Methanocaldococcus jannaschii DSM 2661':1006,('Methanococcus maripaludis S2':641,'Methanococcus voltae A3':720):980):1226):726):571,('Archaeoglobus fulgidus strain DSM 4304':1669,(('Halobacterium salinarium R1':779,('Haloarcula marismortui strain ATCC 43049':824,'Halorubrum lacusprofundi ATCC 49239':883):420):1457,(('Methanospirillum hungatei JF-1':1376,'Methanocorpusculum labreanum Z':1344):1150,('Methanosaeta thermophila strain PT':1395,('Methanosarcina barkeri str. fusaro':1012,'Methanococcoides burtonii DSM 6242':979):908):713):653):1027):940):612):826):805):1306.5);    Tree tree6308 = (('Aquifex aeolicus':0.153364,(('Thermotoga maritima':0.114702,'Thermus thermophilus':0.149186):0.013693,('Cytophaga hutchinsonii':0.258031,('Mycobacterium tuberculosis':0.19077,('Bacillus subtilis':0.126463,('Anaeromyxobacter dehalogenans':0.119917,('Agrobacterium tumefaciens':0.134216,('Escherichia coli':0.08495,'Pseudomonas entomophila':0.054425):0.060612):0.060803):0.047801):0.011041):0.01919):0.07639):0.071028):0.192716,((('Archaeoglobus fulgidus DSM 4304':0.140116,('Nanoarchaeum equitans':0.267989,('Methanopyrus kandleri AV19':0.10005,('Thermococcus kodakarensis Kod1':0.026431,'Pyrococcus abyssi GE5':0.008165):0.06144):0.018082):0.012445):0.012061,('Candidatus Korarchaeum':0.189393,(('Thermofilum pendens HRK 5':0.064507,('Caldivirga maquilingensis IC-167':0.070196,('Thermoproteus neutrophilus V24Sta':0.006954,'Pyrobaculum arsenaticum DSM':0.006829):0.040432):0.042362):0.029489,(('Metallosphaera sedula DSM 5348':0.068837,'Sulfolobus acidocaldarius DSM 639':0.057557):0.096668,('Ignicoccus hospitalis KIN4/I':0.054844,('Aeropyrum pernix K1':0.037396,('Desulfurococcus kamchatkensis':0.038702,'Staphylothermus marinus F1':0.016586):0.020912):0.006499):0.012943):0.025135):0.051702):0.055098):0.005758,(('Uncultured marine crenarchaeote KM3-34-D9':0.036669,('Cenarchaeum symbiosum':0.043509,('Uncultured crenarchaeote 74A4':0.017977,'Nitrosopumilus maritimus SCM1':0.005046):0.02101):0.018857):0.363994,(('Picrophilus torridus DSM9790':0.068662,'Thermoplasma volcanium GSS1':0.052711):0.270332,((('Methanobrevibacter smithii ATCC 35061':0.095538,'Methanothermobacter thermautotrophicus str. delta H':0.047107):0.123164,('Methanocaldococcus jannaschii DSM 2661':0.041779,('Methanococcus maripaludis s2':0.013416,'Methanococcus voltae A3':0.034511):0.103062):0.060741):0.020529,(('Halobacterium salinarium R1':0.044737,('Halorubrum lacusprofundi ATCC 49239':0.083911,'Haloarcula marismortui ATCC 43049':0.082856):0.039914):0.193532,(('Methanospirillum hungatei JF-1':0.06004,'Methanocorpusculum labreanum Z':0.109766):0.099943,('Methanosaeta thermophila PT':0.088336,('Methanosarcina barkeri str. fusaro':0.045959,'Methanococcoides burtonii DSM 6242':0.044932):0.064867):0.02656):0.04107):0.116711):0.002742):0.020033):0.010878):0.192716);
END;