--embed --agent-only pythonVersion 2.7.5+ pythonImplementation CPython Tetrapods false otu342590 otu342760 ^ot:comment ^ot:nodeLabelMode ^ot:nodeLabelTimeUnit tree5096 Institutional archive deposit; no apparent DOI. Chris Owen Jonathan A Rees 639666 Testudines false pg_2415 Guillon, J., Guery L., Hulin V., & Girondot M. 2012. A large phylogeny of turtles (Testudines) using molecular data. Contributions to Zoology 81 (3): 147-158. 2012 Rhinoclemmys melanosterna 203557 Rhinoclemmys melanosterna Tl1071074 Lissemys punctata 619852 Lissemys punctata Tl1071075 Mauremys nigricans 591393 Mauremys nigricans Tl1071076 Chitra vandijki 101476 Chitra vandijki Tl1071077 Podocnemis sextuberculata 674547 Podocnemis sextuberculata Tl1071078 Manouria impressa 679465 Manouria impressa Tl1071079 Mesoclemmys gibba 701152 Mesoclemmys gibba Tl1071080 Phrynops hilarii 66457 Phrynops hilarii Tl1071081 Dipsochelys dussumieri 93887 Aldabrachelys gigantea Tl1071082 Emydura macquarii 2572 Emydura macquarii Tl1071083 Cyclanorbis senegalensis 101464 Cyclanorbis senegalensis Tl1071084 Cyclemys atripons 879761 Cyclemys atripons Tl1071085 Siebenrockiella leytensis 319837 Siebenrockiella leytensis Tl1071086 Geochelone sulcata 1050325 Geochelone sulcata Tl1071087 Cuora trifasciata 26430 Cuora trifasciata Tl1071088 Phrynops geoffroanus 460709 Phrynops geoffroanus Tl1071089 Mesoclemmys hogei 620267 Phrynops hogei Tl1071090 Elseya purvisi 93442 Myuchelys purvisi Tl1071091 Astrochelys yniphora 940487 Astrochelys yniphora Tl1071092 Cuora mouhotii 354928 Cuora mouhotii Tl1071093 Phrynops williamsi 477949 Phrynops williamsi Tl1071094 Psammobates oculifer 990954 Psammobates oculifer Tl1071095 Kinixys spekii 990946 Kinixys spekii Tl1071096 Glyptemys insculpta 743503 Glyptemys insculpta Tl1071097 Chelonoidis chilensis 477704 Chelonoidis chilensis Tl1071098 Pseudemys rubriventris 351864 Pseudemys rubriventris Tl1071099 Amyda cartilaginea 33418 Amyda cartilaginea Tl1071100 Peltocephalus dumeriliana 540332 Peltocephalus dumerilianus Tl1071101 Pelusios sinuatus 235190 Pelusios sinuatus Tl1071102 Graptemys ouachitensis 480212 Graptemys ouachitensis Tl1071103 Cyclanorbis elegans 101463 Cyclanorbis elegans Tl1071104 Natator depressus 895624 Natator depressus Tl1071105 Dermatemys mawii 98390 Dermatemys mawii Tl1071106 Rhinoclemmys pulcherrima 203569 Rhinoclemmys pulcherrima Tl1071107 Acanthochelys pallidipectoris 565695 Acanthochelys pallidipectoris Tl1071108 Mauremys caspica 552142 Mauremys caspica Tl1071109 Kinixys belliana 1041239 Kinixys belliana Tl1071110 Nilssonia nigricans 861371 Nilssonia nigricans Tl1071111 Cyclemys ovata 54221 Cyclemys dentata Tl1071112 Callagur borneoensis 340373 Batagur borneoensis Tl1071113 Malayemys subtrijuga 679463 Malayemys subtrijuga Tl1071114 Batagur baska 361285 Batagur baska Tl1071115 Vijayachelys silvatica 1069292 Vijayachelys silvatica Tl1071116 Sacalia quadriocellata 105481 Sacalia quadriocellata Tl1071117 Podocnemis expansa 709468 Podocnemis expansa Tl1071118 Pseudemys concinna 1003485 Pseudemys concinna Tl1071119 Heosemys depressa 354945 Heosemys depressa Tl1071120 Pelusios subniger 486678 Pelusios subniger Tl1071121 Manouria emys 829105 Manouria emys Tl1071122 Cyclemys tcheponensis 829095 Cyclemys tcheponensis Tl1071123 Nilssonia leithii 854440 Nilssonia leithii Tl1071124 Cuora flavomarginata 85384 Cuora flavomarginata Tl1071125 Platysternon megacephalum 619860 Platysternon megacephalum Tl1071126 Pelochelys bibroni 895649 Pelochelys bibroni Tl1071127 Homopus femoralis 777385 Homopus femoralis Tl1071128 Podocnemis erythrocephala 674543 Podocnemis erythrocephala Tl1071129 Trachemys gaigeae 608020 Trachemys gaigeae Tl1071130 Acanthochelys macrocephala 19159 Acanthochelys macrocephala Tl1071131 Rhinoclemmys areolata 727052 Rhinoclemmys areolata Tl1071132 Pelodiscus axenaria 30435 Pelodiscus axenaria Tl1071133 Testudo kleinmanni 344624 Testudo kleinmanni Tl1071134 Dermochelys coriacea 243403 Dermochelys coriacea Tl1071135 Trionyx triunguis 598954 Trionyx triunguis Tl1071136 Mauremys annamensis 85372 Mauremys annamensis Tl1071137 Rhinoclemmys diademata 727051 Rhinoclemmys diademata Tl1071138 Rhynchocephalia 35876 Sphenodontia Tl1071139 Chelonia mydas 559133 Chelonia mydas Tl1071140 Malaclemys terrapin 1064070 Malaclemys terrapin Tl1071141 Geoemyda japonica 85379 Geoemyda japonica Tl1071142 Cuora mccordi 6859 Cuora mccordi Tl1071143 Cuora galbinifrons 85387 Cuora galbinifrons Tl1071144 Rhinoclemmys punctularia 203555 Rhinoclemmys punctularia Tl1071145 Graptemys pulchra 480185 Graptemys pulchra Tl1071146 Homopus signatus 777390 Homopus signatus Tl1071147 Kachuga dhongoka 340369 Batagur dhongoka Tl1071148 Trachemys terrapen 608017 Trachemys terrapen Tl1071149 Trachemys scripta 725741 Trachemys scripta Tl1071150 Testudo graeca 207423 Testudo graeca Tl1071151 Emys trinacris 592138 Emys trinacris Tl1071152 Apalone ferox 378502 Apalone ferox Tl1071153 Heosemys grandis 54216 Heosemys grandis Tl1071154 Dipsochelys arnoldi 568294 Dipsochelys arnoldi Tl1071155 Elseya latisternum 562326 Myuchelys latisternum Tl1071156 Kinixys erosa 410009 Kinixys erosa Tl1071157 Platemys platycephala 709464 Platemys platycephala Tl1071158 Dipsochelys hololissa 119519 Dipsochelys hololissa Tl1071159 Psammobates tentorius 464470 Psammobates tentorius Tl1071160 Terrapene carolina 848786 Terrapene carolina Tl1071161 Elusor macrurus 557461 Elusor macrurus Tl1071162 Mauremys megalocephala 354938 Mauremys megalocephala Tl1071163 Emys orbicularis 733093 Emys orbicularis Tl1071164 Cyclemys pulchristriata 615604 Cyclemys pulchristriata Tl1071165 Trachemys decorata 608023 Trachemys decorata Tl1071166 Cycloderma frenatum 101466 Cycloderma frenatum Tl1071167 Podocnemis unifilis 528625 Podocnemis unifilis Tl1071168 Heosemys spinosa 619859 Heosemys spinosa Tl1071169 Melanochelys trijuga 105484 Melanochelys trijuga Tl1071170 Nilssonia formosa 623211 Nilssonia formosa Tl1071171 Rhinoclemmys annulata 727059 Rhinoclemmys annulata Tl1071172 Chrysemys picta 587300 Chrysemys picta Tl1071173 Pelusios gabonensis 471348 Pelusios gabonensis Tl1071174 Graptemys pseudogeographica 1092200 Graptemys pseudogeographica Tl1071175 Pyxis arachnoides 859764 Pyxis arachnoides Tl1071176 Pseudemys suwanniensis 848507 Pseudemys suwanniensis Tl1071177 Chelonoidis nigra 284917 Chelonoidis nigra Tl1071178 Rhinoclemmys funerea 727054 Rhinoclemmys funerea Tl1071179 Eretmochelys imbricata 430337 Eretmochelys imbricata Tl1071180 Testudo hermanni 207422 Testudo hermanni Tl1071181 Malacochersus tornieri 1041246 Malacochersus tornieri Tl1071182 Mauremys sinensis 879764 Mauremys sinensis Tl1071183 Kinixys natalensis 990947 Kinixys natalensis Tl1071184 Hydromedusa tectifera 357173 Hydromedusa tectifera Tl1071185 Pangshura tentoria 115586 Pangshura tentoria Tl1071186 Geoemyda spengleri 105478 Geoemyda spengleri Tl1071187 Graptemys nigrinoda 905287 Graptemys nigrinoda Tl1071188 Homopus boulengeri 777392 Homopus boulengeri Tl1071189 Apalone spinifera 149798 Apalone spinifera Tl1071190 Sternotherus odoratus 487672 Sternotherus odoratus Tl1071191 Pseudemys gorzugi 848504 Pseudemys gorzugi Tl1071192 Graptemys oculifera 905289 Graptemys oculifera Tl1071193 Astrochelys radiata 859767 Astrochelys radiata Tl1071194 Indotestudo elongata 679459 Indotestudo elongata Tl1071195 Testudo marginata 344622 Testudo marginata Tl1071196 Trachemys stejnegeri 608016 Trachemys stejnegeri Tl1071197 Emys marmorata 743507 Emys marmorata Tl1071198 Leucocephalon yuwonoi 782430 Leucocephalon yuwonoi Tl1071199 Siebenrockiella crassicollis 54218 Siebenrockiella crassicollis Tl1071200 Chelodina longicollis 235769 Chelodina longicollis Tl1071201 Indotestudo forstenii 829107 Indotestudo forstenii Tl1071202 Kachuga trivittata 7583 Batagur trivittata Tl1071203 Lissemys scutata 101468 Lissemys scutata Tl1071204 Batagur affinis 154908 Batagur affinis Tl1071205 Aves 81461 Aves Tl1071206 Pangshura smithii 61733 Pangshura smithii Tl1071207 Testudo horsfieldii 809861 Testudo horsfieldii Tl1071208 Cuora pani 26431 Cuora pani Tl1071209 Morenia ocellata 679473 Morenia ocellata Tl1071210 Mesoclemmys nasutus 508309 Mesoclemmys nasuta Tl1071211 Pelusios williamsi 149795 Pelusios williamsi Tl1071212 Clemmys guttata 436621 Clemmys guttata Tl1071213 Kinosternon flavescens 487667 Kinosternon flavescens Tl1071214 Pseudemys alabamensis 848502 Pseudemys alabamensis Tl1071215 Acanthochelys spixii 477943 Acanthochelys spixii Tl1071216 Podocnemis vogli 674544 Podocnemis vogli Tl1071217 Hardella thurjii 711706 Hardella thurjii Tl1071218 Sacalia bealei 137549 Sacalia bealei Tl1071219 Rhinoclemmys rubida 727058 Rhinoclemmys rubida Tl1071220 Lepidochelys kempii 587328 Lepidochelys kempii Tl1071221 Emydoidea blandingii 1013355 Emydoidea blandingii Tl1071222 Chitra indica 402511 Chitra indica Tl1071223 Crocodylidae 335582 Crocodylidae Tl1071224 Kachuga sylhetensis 748759 Pangshura sylhetensis Tl1071225 Chelonoidis denticulata 1050326 Chelonoidis denticulata Tl1071226 Kinosternon baurii 487669 Kinosternon baurii Tl1071227 Geochelone platynota 464474 Geochelone platynota Tl1071228 Pelomedusa subrufa 775044 Pelomedusa subrufa Tl1071229 Cyclemys fusca 537636 Cyclemys fusca Tl1071230 Mauremys leprosa 26437 Mauremys leprosa Tl1071231 Chelonoidis carbonaria 560352 Chelonoidis carbonaria Tl1071232 Gopherus agassizii 831059 Gopherus agassizii Tl1071233 Cyclemys gemeli 33171 Cyclemys gemeli Tl1071234 Macrochelys temminckii 1084896 Macrochelys temminckii Tl1071235 Cyclemys enigmatica 54219 Cyclemys Tl1071236 Cuora amboinensis 626958 Cuora amboinensis Tl1071237 Chelodina rugosa 235764 Chelodina rugosa Tl1071238 Kinixys homeana 1041243 Kinixys homeana Tl1071239 Lepidochelys olivacea 430320 Lepidochelys olivacea Tl1071240 Mauremys mutica 679467 Mauremys mutica Tl1071241 Erymnochelys madagascariensis 775068 Erymnochelys madagascariensis Tl1071242 Caretta caretta 392505 Caretta caretta Tl1071243 Cycloderma aubryi 101465 Cycloderma aubryi Tl1071244 Podocnemis lewyana 211855 Podocnemis lewyana Tl1071245 Gopherus polyphemus 831062 Gopherus polyphemus Tl1071246 Trachemys decussata 608019 Trachemys decussata Tl1071247 Elseya dentata 235771 Elseya dentata Tl1071248 Apalone mutica 598956 Apalone mutica Tl1071249 Rheodytes leukops 1013512 Rheodytes leukops Tl1071250 Pyxis planicauda 859765 Pyxis planicauda Tl1071251 Nilssonia gangeticus 419102 Nilssonia gangetica Tl1071252 Psammobates pardalis 776504 Stigmochelys pardalis Tl1071253 Staurotypus triporcatus 149793 Staurotypus triporcatus Tl1071254 Mauremys rivulata 1078568 Mauremys rivulata Tl1071255 Glyptemys muhlenbergii 743501 Glyptemys muhlenbergii Tl1071256 Emydura subglobosa 198154 Emydura subglobosa Tl1071257 Chersina angulata 752334 Chersina angulata Tl1071258 Rafetus euphraticus 623208 Rafetus euphraticus Tl1071259 Cuora yunnanensis 26440 Cuora yunnanensis Tl1071260 Indotestudo travancorica 879768 Indotestudo travancorica Tl1071261 Rhinoclemmys nasuta 737459 Rhinoclemmys nasuta Tl1071262 Orlitia borneensis 105476 Orlitia borneensis Tl1071263 Squamata 35888 Squamata Tl1071264 Cuora zhoui 711704 Cuora zhoui Tl1071265 Cyclemys oldhamii 3606372 Cyclemys oldhami Tl1071266 Graptemys versa 922328 Graptemys versa Tl1071267 Geochelone elegans 302068 Geochelone elegans Tl1071268 Dogania subplana 828072 Dogania subplana Tl1071269 Graptemys barbouri 905270 Graptemys barbouri Tl1071270 Notochelys platynota 711698 Notochelys platynota Tl1071271 Chelydra serpentina 587311 Chelydra serpentina Tl1071272 Acanthochelys radiolata 682380 Acanthochelys radiolata Tl1071273 Elseya georgesi 562290 Myuchelys georgesi Tl1071274 Heosemys annandalii 354932 Heosemys annandalii Tl1071275 Pangshura tecta 437360 Pangshura tecta Tl1071276 Pseudemydura umbrina 507380 Pseudemydura umbrina Tl1071277 Graptemys caglei 515020 Graptemys caglei Tl1071278 Pelochelys cantorii 402522 Pelochelys cantorii Tl1071279 Deirochelys reticularia 848781 Deirochelys reticularia Tl1071280 Cyclemys bellii 617236 Cyclemys bellii Tl1071281 Cyclemys dentata 54221 Cyclemys dentata Tl1071282 Terrapene ornata 1013359 Terrapene ornata Tl1071283 Graptemys flavimaculata 835313 Graptemys flavimaculata Tl1071284 Mauremys reevesii 829098 Mauremys reevesii Tl1071285 Gopherus flavomarginatus 1041230 Gopherus flavomarginatus Tl1071286 Trachemys dorbigni 735232 Trachemys dorbigni Tl1071287 Pseudemys peninsularis 351865 Pseudemys peninsularis Tl1071288 Pseudemys texana 981321 Pseudemys texana Tl1071289 Cuora aurocapitata 905071 Cuora aurocapitata Tl1071290 Chitra chitra 402510 Chitra chitra Tl1071291 Carettochelys insculpta 810244 Carettochelys insculpta Tl1071292 Palea steindachneri 3697 Palea steindachneri Tl1071293 Chelodina oblonga 235762 Chelodina oblonga Tl1071294 Chelus fimbriatus 235773 Chelus fimbriatus Tl1071295 Geoclemys hamiltonii 879770 Geoclemys hamiltonii Tl1071296 Homopus areolatus 4948081 Homopus areolatus Tl1071297 Nilssonia hurum 419107 Nilssonia hurum Tl1071298 Psammobates geometricus 464467 Psammobates geometricus Tl1071299 Gopherus berlandieri 1041231 Gopherus berlandieri Tl1071300 Graptemys geographica 1064023 Graptemys geographica Tl1071301 Terrapene nelsoni 848784 Terrapene nelsoni Tl1071302 Kachuga kachuga 859923 Batagur kachuga Tl1071303 Pelodiscus sinensis 143391 Pelodiscus sinensis Tl1071304 Pseudemys nelsoni 526264 Pseudemys nelsoni Tl1071305 Terrapene coahuila 848785 Terrapene coahuila Tl1071306 Mauremys japonica 26434 Mauremys japonica Tl1071307 ot:substitutionCount ML tree node882260 node882252 false true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true